CURRICULUM VITAE
BONNER, James S., Ph.D., P.E. PROFESSIONAL LICENSE:
Executive Director, Shoreline Environmental Registered Professional Engineer
Research Facility
(SERF)
US Citizenship
PROFESSIONAL
INTERESTS:
Biodegradation kinetics for hazardous organic wastes; Coastal processes & oceanographic observations; Transport, fate and effects modeling; Physical, chemical and biological processes; Aquatic chemistry; Environmental hazard assessment and site remediation; Water resources
EDUCATION:
Ph.D., Civil & Environmental
Engineering,
M.S., Civil
& Environmental Engineering,
B.A.,
Biology,
EXPERIENCE:
Executive Director of the Shoreline Environmental Research Facility (Research Institute for the Gulf Coast Near-shore Environment) 1997-Present
Executive Director of the Conrad Blucher Institute for Surveying and Science, Texas A&M University – Corpus Christi, 1997-2005
Regional Director of the Texas Engineering Experiment Station, Texas A&M University System, 1997-2005
Professor, Dept. of Civil Engineering, Texas A&M University, 2005-Present
River and Estuaries Center Research & Partnership Working Committee, Hudson River Beacon Hills NY, 2005-Present
Associate Professor, Department of Civil Engineering, Texas A&M University, 1992-2005
Assistant Professor,
Visiting
Assistant Professor, Department of Environmental Sciences,
Computer
Sciences Corporation,
Instructor, Clarkson College of Technology, 1981-1983
Research Assistant, Clarkson College of Technology, 1977-1981
Fisheries Technician, New York State Department of Environmental Conservation, 1977
EDUCATIONAL
CONTRIBUTIONS:
Director of the Environmental Engineering Ph.D. Pipeline recruiting underrepresented students from majority/minority institutes.
Co-Founder WALDEN (University Consortia involving faculty from Virginia Tech.,
Michigan Tech., Princeton and
Directed distance learning program for Engineering using WAN.
Courses taught and developed: Introductions to Computing for Engineers;
Environmental Measurements; Undergraduate Water Quality Modeling;
Numerical Methods; Senior Seminar for Environmental Science; Graduate Water
Quality Modeling; Physical
Processes (Grad.); Bioprocesses (Grad).
ADMINISTRATIVE
CONTRIBUTIONS:
Director of CBI: Used synergy approach
to reestablish friendly and productive work environment and restored fiscal
solvency (CBI was in contract default 2.4 million dollars). Current status no
default, 16 million dollar research infrastructure and 4 million dollar
research budget.
Director of Facilities: Shoreline Environmental Research Facility (SERF) with
wastewater treatment plant (5 million dollars - 4 environmental permits);
Wetland Research Facility (0.5 million dollars - 1 environmental permit);
Environmental Analysis Laboratory (4 million dollars).
STUDENT RESEARCH ADVISING:
A. M.S. Students (graduated)
Sharon Ducharme, “Design and Validation of a Settling Column for Particle Transport Studies,” May 1989.
Stephanie Saunders, “Vertical Transport and Dynamic Size
Distribution of
Ravindra Malali, “Flocculation Potential of
Daniel Hernandez, “The Determination of Settling Velocities for Sewage Sludge Disposed at 106-Mile Site,” December 1991.
Timothy Green, “Supercritical Fluid Extraction and Chromatography Using a Lee Scientific Series 600 SFE/SFC System,” May 1992.
Marc A. Mills, “Biodegradation of Petroleum Hydrocarbons in Aqueous and Sediment Environments,” August 1994.
Kameswara Ayalasomayajula, “Monitoring the Extent of Petroleum Biodegradation,” May 1993.
Beatrice Lambert, “Acute Toxicity of the Water Soluble Fraction of
Shahrukh Kanga, “Solubilization of Petroleum Hydrocarbons Using Biosurfactants” December 1995.
Andrew Waite, “The Usefulness of Solid Oxidants for Biostimulation, Determined by Their Kinetics and Stoichiometry” December 1996.
Jeffrey Bauguss, “Accelerated Solvent Extraction of Petroleum Contaminated Sediments” May 1997.
Cord Harris, “Nutrient Dynamics in Marsh Sediments Contaminated by an Oil Spill Following a Flood” May 1997.
Cheryl Page, “Enhanced Solubility of Petroleum Hydrocarbons Using Biosurfactants” May 1997.
Jason Leik, M.S., “Subsurface Characterization of the
Danica Mueller, M.S., “Toxicity of Oiled Wetland Sediments Influenced by Natural and Enhanced Bioremediation” December 1998.
Richard T. Townsend, M.S., “The Effect of Bioremediation on Microbial Populations in an Oil-Contaminated Coastal Wetland,” December 1999.
Frank L. Stephens, M.S., “Thin Layer Chromatography – Flame Ionization Detection Analysis Of In-Situ Petroleum Biodegradation,” August 2004.
B. M.S. Students (active)
Anne Williams – TAMUCC (co-chair)
Gerardo Arrambide – TAMUCC (co-chair)
Laurie Schreiber, “Fate and Transport of PCB’s in the New Bedford
Harbor Superfund Site,” August 1993.
Heather Coryea, “PCBs as Environmental Pollutants: With an Emphasis on
Jason K. Christian, “Extracellular Enzymatic Systems of Phanerochaete Chrysosporium,” December 1994.
Barbara Sylvester, “Dispersion in the
Sandra L. Lorfing, “Microbial Interactions for the Biodegradation of Xenobiotic Compounds,” December 1994.
Nimish Katwala, “Solubilization of Petroleum Hydrocarbons Using Biosurfactants: A Literature Review,” May 1996.
Sanjay Singh, “Microbial Petroleum Degradation Enhancement by Oil Spill Bioremediation Products,” August 1996.
Mary E. Carder, “The Role of Contaminant Partitioning and Mass Transport on Subsurface Biodegradation,” December 1996.
Brian Levin, “Remediation of Hydrocarbon Contaminated Groundwater at a Petrochemical Facility through Natural Attenuation and Source Control,” May 1997.
Jennifer Ham, Environmental Site Assessment and Conceptual
Remediation Design for
John Hickman, “Sediment Transport in the
D. Ph.D. Students (graduated)
Andrew N.S. Ernest, “A Mathematical Model of Particle Mediated
Transport of Hazardous Materials in Aqueous Systems,” October 1991.
Dugon Lee, “Mathematical Modeling of Particle Aggregation and Vertical Transport in Aquatic Environments Using Fractal and Curvilinear Approaches,” August 1996.
Laurie Schreiber Garton, NSF Fellow, “Characterization of Particles and Particle-Particle Interactions Under Known Chemical and Hydrodynamic Conditions” May 1997.
Marc A. Mills, “Bioremediation of Petroleum Hydrocarbon in Aqueous and Sediment Environments.” August 1997.
Cheryl Page, “Oil Spill Chemical Countermeasure Use in Near-Shore Environments.” August 2000.
Michael Sterling, “Aggregation and Transport Kinetics of Crude Oil and Sediment in Estuarine Waters” December 2003
Temitope Ojo, “Method of Contaminant Transport Modeling in 3-D Using Real Time Variables Coupled with Adaptive Grid Numerical Algorithm: Application to Estuaries and Shallow Embayment.” May 2005.
E. Ph.D. Students (active)
Chris Fuller, “Ecological toxicity of oilspill chemical countermeasures,” in progress
John Perez, “Development of Environmental Sensors to Characterize Episodic Events”, in progress.
Dorothy Tillman, “Coupling of Ecological and Water Quality Models for Improved Water Resource Management,” in progress.
Shahidul Islam
REFERRED PUBLICATIONS (1997-PRESENT)
Simon, M.A., Bonner, J.S.,
Fuller*,
C., Bonner, J.,m Ernest,
A.,McDonald, T., and McDonald, S.
Comparative
Toxicity Of Oil, Dispersant, And Dispersed Oil To Texas Marine Species, Environmental
Toxicology and Chemistry, Vol. 23, No. 12, pp. 2941-2949, 2004.
Mills*, M.A., Bonner, J.S., McDonald, T.J., and Autenrieth, R.L., (2004) “Bioremediation of an Experimental Oil Spill in a Wetland,” Marine Pollution Bulletin, 49(5-6), 425-435.
Sterling*, M., Bonner, J., Ernest, A., Page, C., and Autenrieth, R., (2004) Characterizing Aquatic Particulate-Oil Flocs Using In-Situ Instruments, Marine Pollution Bulletin, Vol 48(5-6), 533-542.
Sterling, M.C., Bonner, J.S., Ernest, A.N.S., Page, C.A. and Autenrieth, R.L., "Application of fractal aggregation and vertical transport model to aquatic sol-sediment systems,” Water Research, Vol 39 (9), 1818-1830, 2005.
LaRiviere, D.,
Autenrieth, R.L., and Bonner, J.S. (2004) “Redox dynamics of a
tidally-influenced wetland on the
Sterling*, M., Bonner, J., Ernest, A., Page, C., Fuller, M., and Autenrieth, R., Partitioning of Crude Oil Polycyclic Aromatic Hydrocarbons in Aquatic Systems, Environmental Science and Technology, 37, 4429-4434.
Mills*, M.A., Bonner, J.S., McDonald, T., Page, C.and Autenrieth, R.L., (2003) “Evaluation of Intrinsic Remediation of a Petroleum-Contaminated Wetland”, Marine Pollution Bulletin, 46(7), 887-899.
LaRiviere D., R.L. Autenrieth and J.S. Bonner (2003) “Redox dynamics during recovery of an oil-impacted estuarine wetland”, Water Research 37, 3307-3318.
Mueller*, D., Bonner,
J., McDonald, S., Autenrieth, R., Donnelly, K., Lee, K., Doe, K., and
Bonner, J., Page, C., Fuller, C. “Meso-Scale Testing and Development of Test Procedures to Maintain Mass Balance”, Marine Pollution Bulletin, 47(9-12), 406-414, 2003.
Ojo*, T., J.S. Bonner, F.J. Kelly,
C.A. Page, J. Perez, C. Fuller and M. Sterling (in press), "Adaptive sampling
for coastal environmental monitoring using a georeferenced mobile instrument
platform and correlative data visualization". Building the European
Capacity in Operational Oceanography - Proceedings of the Third International
Conference on EuroGOOS, Dahlin et al. Eds,
Lee*, D.G., Bonner, J. S., Garton, L.S., Ernest, A.N.S. and Autenrieth, R.L.
(2002) “Modeling Coagulation Kinetics
Incorporating Fractal Theories: Comparison with Observed Data," Water
Research, 36(4), 1056-1066.
Page*,
Mills*, M.A., Bonner, J.S., and Autenrieth, R.L., “Evaluation of Intrinsic Remediation of a Petroleum-Contaminated Wetland”, Marine Pollution Bulletin, accepted 29 August 2002, in press.
Mueller*, D., Bonner, J., McDonald, S., Autenrieth, R., Donnelly, K., Lee, K., Doe, K., and Anderson, J., “The Use of Toxicity Bioassays to Monitor the Recovery of Oiled Wetland Sediments," accepted to Environmental Toxicology and Chemistry in September 2002.
Page*, C., Bonner, J.S., Sumner, P.L., McDonald, T.J., Autenrieth, R.L., and Fuller, C.B., (2000) “Behavior of a Chemically-Dispersed Oil and a Whole Oil on a Near-Shore Environment,” Water Research, 34(9): 2507-2516.
Lee*, D.G. , Bonner, J. S., Garton, L.S., Ernest, A. N. S. and Autenrieth, R. L.,(2000) “Modeling Coagulation Kinetics Incorporating Fractal Theories: A Fractal Rectilinear Approach," WaterResearch, 34(7): 1987-2000.
Page*, C., Bonner, J., Kanga, S., Mills, M., and Autenrieth, R., (1999) “Biosurfactant Solubilization of PAHs,” Environmental Engineering Science, Volume 16(6),
465-474.
Mueller*, D.C., Bonner,
J.S., McDonald, S.J., and Autenrieth, R.L., (1999) “Acute Toxicity of Estuarine Wetland
Sediments Contaminated by Petroleum,” Environmental
Technology, 20: 875-882.
Mills*, M.A., McDonald, T.J., Bonner, J.S., Simon, M.A., and Autenrieth, R.L., (1999) “Method for Quantifying the Fate of Petroleum in the Environment.” Chemosphere 39(14): 2563-2582.
Waite*, A., Bonner, J.S. and Autenrieth, R.L., “Kinetics and Stoichiometry of Oxygen Release from Solid Peroxides,” (1999) Environmental Engineering Science, Vol 16(3): 187-199.
Harris B.C.*, Bonner J.S. and Autenrieth, R.L., (1999) “Nutrient Dynamics in Marsh Sediments Contaminated by an Oil Spill Following a Flood,” Environmental Technology, Vol. 20: pp 795-810.
Zhang, Y., Autenrieth, R., Bonner, J.,
Bae, BumHan, Autenrieth, R., and Bonner, J., (1999) “Baseline Separation of 2, 4, 6-Trinitrotoulene (TNT) and its Biotransformation Products HPLC: Precautions for Analytes Loss,” Environmental Engineering Research, 4(2): 135-142.
Aldrett*, S., Bonner, J.S., Mills, M.A., Autenrieth, R.L. and Stephens, F., (1997) “Microbial Degradation of Crude Oil in Marine Environments Tested in a Flask Experiment,” Water Research, Vol. 31(11): pp. 2840-2848.
*Designates a student advisee.
Book
Chapters
Bonner, J.S., Kelly, F.J., Michaud,
P.R.,
LaRiviere, D., Harris, B.C., Autenrieth, R.L., Bonner, J.S., and Keith, N. Electron acceptor consumption during
petroleum degradation in microcosm experiments. In: Proceedings of the Sixth
International In Situ and On-Site Bioremediation Symposium, Phytoremediation
and Wetlands for Remediation of Contaminated Areas, Battelle Press, Columbus,
Ohio, Vol 6, No. 5, A. Leeson, E. Foote, K. Banks, and V. Magar (eds.),
Battelle Press, Columbus, OH, 6(5), pp. 25-32, 2001.
Harris, B.C., LaRiviere, D., Autenrieth, R.L., Bonner, J.S., McDonald, T.J., and Dimitriou-Christidis, P. Comparison of petroleum biodegradation potential with alternative electron acceptors. In: Proceedings of the Sixth International In Situ and On-Site Bioremediation Symposium, Phytoremediation and Wetlands for Remediation of Contaminated Areas, A. Leeson, E. Foote, K. Banks, and V. Magar (eds.), Battelle Press, Columbus, Ohio, Vol. 6, No. 5, pp.17-24, 2001.
Bizzell, C.J., Autenrieth, R.L., Townsend, T., Bonner, J., “Shoreline Cleaner Evaluation on a Petroleum-Impacted Wetland,” in In situ and On-Site Bioremediation Symposium, Phytoremediation and Innovative Strategies for Specilized Remedial Applications, Battelle Press, San Diego, CA, April 19-22, 1999, Volume 6, p.57-62.
Autenrieth, R.L., Zhang, Y., Wenaas, C., Bonner, J.S., “Process Evaluation for Sarin Destruction,” In Situ and On-Site Bioremediation, Vol. 5, Alleman, B.C. and Leeson, A., eds., Battelle Press, 4(5): p. 49, 1997.
Ham*, J.G.
and Bonner, J.S., “Environmental
Site Assessment & Bioremediation” Perspectives
in Bioremediation: Technologies for Environmental Improvement, Wild, J.R.,
Hallgarth, M., Jankowski, M., Autenrieth, R.L., Bonner, J.S., “Biodegradation of RDX and HMX,” In Situ and On-Site Bioremediation: Vol. 2, Alleman, B.C., and Leeson, A., eds. Batelle Press, 4(2): p. 17, 1997.
*Designates a student advisee.
Bonner, J., Kelly,
F., Page, C., Perez, J., Fuller, C., Ojo, T. Sensing Coastal Ecosystems. In the Proceedings of the 9th Federation of European chemical
Societies (FECS) Conference on Chemistry and the Environment (Behavior of
Chemicals in the Environment).
Bonner, J., Cahill, A., callicott, K., Caso, R., Chang, N.,
Froyd, J., john, K., Kramer, T., Olivera, F., Page, C., Uddameri, V., Combining
Research with Curriculum Development for Environmental Informatics. In
the Proceedings of the 9th
Federation of European chemical Societies (FECS) Conference on Chemistry and
the Environment (Behavior of Chemicals in the Environment).
Bonner , J., Callicott, K., Page, C, “Integration of Research Into Grade Nine-Graduate Level Curricula”, American Geophysical Union Joint Assembly 2004, Montreal, Canada, May 17-21, 2004, on CD-ROM.
Kelly, F.J., J.S.
Bonner, T. Ojo,
and Al Durel, (in press).
Port
Ojo*, T, Bonner, J., Sterling, S., Fuller, C., Page, C., Kelly, F. (2003) “Multi-Parameter Instrument Array and Control System (MPIACS): A Software Interface Implementation Of Real-Time Data Acquisition and Visualization of Environmental Monitoring”, in the Proceedings of the Oceans 2003 Marine Technology and Ocean Science Conference, San Diego, CA, Sept 22-25, 2003, on CD-ROM.
Bonner, J., Page, C., Cahill, A., Caso, R., Froyd, J., Kramer, T., Olivera, F., Chang, N-B., John, K., Uddameri, V. “Combining Research with Curriculum Development: New Technologies Associated with Assessment Methods for the Environment”, Frontiers in Assessment Methods for the Environment (FAME) Conference, AEESP, University of Minnesota, Minneapolis, MN, August 11-13, 2003.
Sterling*,
M.C., Bonner, J. S., Ojo, T., Page, C.A., Ernest, A.N.S, Autenrieth,
R.L.
Application of Particle Population Kinetics in Modeling the Vertical
Transport of Chemically Dispersed Crude Oil.
Proceedings of the Twenty-sixth
Arctic and Marine Oilspill Program (AMOP) Technical Seminar. Environment
Ojo*,
T., Bonner, J. S., Sterling, M.C., Fuller, C.B., Page, C.A., Autenrieth,
R.L.
Implementation of Distributed Computing System for Emergency Response and
Contaminant Spill Monitoring. Proceedings of the Twenty-sixth Arctic and
Marine Oilspill Program (AMOP) Technical Seminar. Environment
Sterling*,
M.C., Fuller, C.B., Bonner, J. S., Ojo, T., Page, C.A.,
Field
Instruments for Real Time In-Situ Crude Oil Concentration Measurements. Proceedings
of the Twenty-sixth Arctic and Marine Oilspill Program (AMOP) Technical
Seminar. Environment
LaRiviere,
D., Bonner, J.S., Autenrieth, R.L.,
Biodegradation of oil-contaminated
sediments: Effect of a dispersant and natural organic matter. Proceedings
of the Twenty-sixth Arctic and Marine Oilspill Program (AMOP) Technical
Seminar. Environment
Bonner, J.S., Kelly, F.J., Michaud, P.R., Page, C.A., Perez, J. Fuller, C.B., Ojo, T., and Sterling, M. , Sensing the Coastal Environment, Proceedings of the Third Annual EuroGOOS (Global Ocean Observing System) Conference, Dec 3-6, 2002, Athens Greece, 2003 (in press).
Perez*,
J.C., J.S. Bonner, F.J. Kelly, and C. Fuller, 2003.
Development of a
Cheap, GPS-Based, Radio-Tracked, Surface Drifter for Closed Shallow-Water Bays.
Proceedings of the Institute of Electrical and Electronics Engineers
(IEEE) 7th Working Conference on Current
Measurement Technology, March 13-15,
Kelly,
F.J., J.S. Bonner, J.C. Perez, D.
Ojo*,
T.O., M. Sterling, J.S. Bonner, F.J.
Aguilar,
H., Fitzgerald, R., Barrick, D., Bonner, J., Perez, J., (2003) Modeling
of Surface Currents in the Corpus Christi Bay using Normal Mode Analysis,
Proceedings of the Institute of Electrical and Electronics Engineers
(IEEE) 7th Working Conference on Current
Measurement Technology, March 13-15, 2003, San Diego, CA, pp. 101-104.
Aguilar, H., Fitzgerald, R., Barrick, D., Bonner, J., Perez, J. (2003) Least Squares Fitting of Normal Modes directly to HF Radar Radial Vector Current Maps in Corpus Christi Bay, Proceedings of the International Symposium in USNC-URSI National Radio Science Meeting, San Antonio, Texas.
Perez*, J.C.,
J.S. Bonner, F.J. Kelly, and C.
Fuller, 2003.
Development of a Cheap, GPS-Based, Radio-Tracked, Surface Drifter
for Closed Shallow-Water Bays. Proceedings of the IEEE 7th Working Conference
on Current Measurement Technology, March 13-15,
Bonner, J., Williamson,
L., Callaway, A., and Page, C.
Oil Degrading Microbial Populations Along the
Harris, B.C., Bonner, J., Dimitriou-Christidis, P., McDonald, T.,
Harris, B.C., Bonner, J., Dimitriou-Christidis, P., McDonald, T.,
LaRiviere, D. and Bonner J.
Oxidation
Of Rhizosphere Sediments By Alternanthera Philoxeroides: Roots To Quicker
Petroleum Degradation? Proceedings of
the Twenty-fifth Artic and Marine Oilspill Program (AMOP) Technical Seminar.
Environment
Ojo*, T., Bonner, J.
Three-Dimensional Self-Calibrating Coastal Oil Spill Trajectory Tracking
And Contaminant Transport Using Hf Radar.
Proceedings of the Twenty-fifth Artic and Marine Oilspill Program (AMOP)
Technical Seminar. Environment
Page,
C., Bonner, J., and Fuller, C.
Dispersant Effectiveness in a Simulated Shallow Embayment. Proceedings of the Twenty-fifth Artic and
Marine Oilspill Program (AMOP) Technical Seminar. Environment
Fuller*, C., Bonner, J., Bujnoch, D., and
Page*, C., Bonner, J., McDonald, T., and
Autenrieth, R. (2001) “Behavior of Chemically-dispersed Oil in a Wetland
Environment,” Proceedings from the 2001 International Oil Spill Conference,
Global Strategies for Prevention, Preparedness, Response and Restoration. American Petroleum Institute (
Fuller*, C. and Bonner,
J. (2001) “Comparative Toxicity of Oil, Dispersant, and Dispersed Oil to
Page*, C., Bonner, J., Fuller, C., Louchouarn, P.,
Tissot, P., McDonald, T., and Autenrieth, R. (2001) “Shoreline Cleaner Use in a
Sandy Beach Environment.” Proceedings from the 2001 International Oil Spill
Conference, Global Strategies for Prevention, Preparedness, Response and
Restoration. American Petroleum
Institute (
Louchouarn, P Bonner, J.S., Tissot, P., McDonald, T.J., Fuller, C.B., and Page, C., “Quantitative Determination of Oil Films/Slicks from Water Surfaces Using a Modified Solid-phase Extraction (SPE) Sampling Method,” Twenty-third Arctic and Marine Oilspill Program (AMOP) Technical Seminar, (23) vol. 1: pp 59-68, June 2000.
Tissot, P., Fuller, C., Louchouarn, P., Bonner J.S., Dellamea, S., and Bujnoch, D., “Quantitative Method for Surface Oil Measurement and Recovery Based on a New Type of Low Impact Skimmer,” Twenty-third Arcticand Marine Oilspill Program (AMOP) Technical Seminar, (23) vol. 1: pp 353-366, June 2000.
Page*, C., Fuller, C., Autenrieth, R., Bonner, J.S., Louchouarn, P., Tissot, P., and McDonald, T., “Materials Balance on an Oil Washed from a Sandy Substrate Using Shoreline Cleaners,” wenty-third Arctic and Marine Oilspill Program (AMOP) Technical Seminar, (23) vol. 2: pp 697-708, June 2000.
Fuller*, C., Bonner, J.S., Dellamea, S., Ussery, S.,
Tissot, P., Louchouarn, P., Page, C.,
and McDonald, T., “Ecological Evaluation of Shoreline Cleaners Used on
Bizzell, C., Townsend, R. T., Bonner J., Autenrieth, R. (1999) “Shoreline Cleaner Evaluation on a Petroleum Impacted Wetland”, In the Fifth International In-Situ and On-Site ioremediation Symposium,Phytoremediation and Innovative Strategies for Specialized emedialApplications, Ed(s) Andrea Leeson and Bruce Alleman, Battelle Press, San Diego, CA, April 19-22, 6: 57-62.
Bonner, J.,
Mills, M., Simon, M., Bizzell, C., Page, C., McDonald, T., and Autenrieth, R.
(1999) “ A Five-Year Overview of Spilled Petroleum Remediation at a Wetland
Research Facility”, Proceedings of the Battelle Wetlands and Remediation
Conference, November 16-17,
Mueller*,
D.C., J.S. Bonner, R.L. Autenrieth,
K. Lee, and K. Doe (1999) “The Toxicity of Oil-Contaminated Sediments
during Bioremediation of a Wetland.” Proceedings
of the 1999 International Oil Spill Conference-Beyond 2000:Balancing
Perspectives,
Stephens*, F. L., Bonner, J.S., Autenrieth, R. L., and McDonald, T. J., “TLC/FID Analysis of Compositional Hydrocarbon Changes Associated with Bioremediation,” Proceeding of the 1999 International Oil Spill Conference-Beyond 2000: Balancing Perspectives, Seattle, WA, March, 1999.
Page*, C., Bonner, J. S., McDonald, T., Sumner, P., and Autenrieth, R.L. “Materials Balance on a Chemically-Dispersed Oil and a Whole Oil Exposed to an Experimental Beach Front,” wenty-second Artic and Marine Oilspill Program (AMOP) Technical Seminar, (22) vol. 2: pp 645-658, June 1999.
Fuller*, C., Bonner, J.S., McDonald, T., Page, C., Aurand, D., Bragin, G., Clark, J., Hernandez, A., Ernest, A., “Comparative Toxicity of Simulated Beach Sediments Impacted with Both Whole and Chemical Dispersions of Weathered Arabian Medium Crude Oil,” Twenty-second Artic and Marine Oilspill Program (AMOP) Technical Seminar, (22) vol. 2: pp 659-670, June 1999.
Lessard,
D., C.B. Fuller, T.J. McDonald, D. Aurand, G. Coelho, R. Jamail, J. Clark, G.
Bragin, and A. Steen. “Design and
Implementation of a Mesocosm Experiment
on the Environmental Consequences of Nearshore Dispersant Use.” 103.
Simon,
M. A., J. S. Bonner, R. T. Townsend,
T. J. McDonald, and R.L. Autenrieth. “Bioremediation of Petroleum in a
Wetland.” In proceedings of 1998 American Association of Petroleum Geologists
Annual Convention,
Chen, C.Y., Ernest, A., Aguilar, R. and Bonner, J.S., “Hydrodynamic Characterization of the COSS (Coastal Oil Spill Simulation System) Wave Tank” Proceeding of the Twenty-first Arctic and Marine Oilspill Program (AMOP) Technical Seminar, (21) vol. 1: pp. 89-99, 1998.
Mueller*,
D.C., Bonner, J.S. and Autenrieth,
R.L., “Toxicological Monitoring of an
Oil Impacted Estuarine Marshland,” Proceedings
of the 1997 International Oil Spill Conference,
Aldrett*, S.,
Bonner, J.S.,
McDonald, T.J., Mills, M.A., Autenrieth, R.L., “Degradation of Crude Oil
Enhanced by Commercial Microbial Cultures,”
Proceedings of the 1997
International Oil Spill Conference,
Wood, T.L.,
Lehman, R. L.,
Bonner, J.S.,
“Ecological Impacts of a Wetland Oil Spill and bioremediation
Experiments,” Proceedings of the 1997 International Oil Spill Conference,
Townsend*,
R.T.,
Bonner, J.S.,
Autenrieth, R.L., “The Effect of Bioremediation on Microbial Populations in an
Oil-Contaminated Coastal Wetland,” Proceedings
of the 1997 International Oil Spill Conference,
Waite*, A.J.
and
Bonner, J.S.,
“Problems and Pitfalls of Virtual Instrumentation and Data Acquisition,” Proceedings of the 1997 International Oil
Spill Conference,
Kitchen, R.
B.,
Bonner, J.S.,
Autenrieth, R.L., Donnelly, K.C., Ernest, A.N.S., “Introducing COSS: A New and Unique Oil Spill Research
Facility,” Proceedings of the Twentieth
Mills*, M.A.,
Bonner, J.S., Simon,
M.A., McDonald, TJ., Autenrieth, R.L., “Bioremediation of a Controlled Oil
Release in a Wetland,” Proceedings of the Twentieth
Harris*,
B.C.,
Bonner, J.S. and Autenrieth, R.L., “Available Nutrient Dynamics in marsh
Sediments Contaminated by an Oil Spill Following a Flood,” Proceedings
of the Twentieth
Stephens*, F. L., Bonner, J. S., McDonald, T.J., Mills, M.A., Autenrieth, R. L., “Using an Automated Iatroscan TLC/FID System to Measure Compositional Hydrocarbons Associated With Petroleum biodegradation,” Proceedings of the Twentieth Arctic and Marine Oilspill Program (AMOP) Technical Seminar, (20) vol. 1: pp 165-174, June 1997.
Leik*, J., and
Bonner, J. (1997) “Subsurface Hydrodynamic
Characterization of a Wetland”, Proceedings of the International Association
for Great Lakes Research (IAGLR),
Leik*, J.A.,
Bonner, J.S., and
Autenrieth, R.L., “Subsurface Characterization of a Coastal Wetland,” Proceedings of the Twentieth
Aldrett*, S.,
Bonner, J.S., Mills,
M., McDonald, T.J., Autenrieth, R.L., “Biodegradation of
Fuller*, C.,
Ernest, A.,
Bonner, J.S.,
and Donnelly, K.C., “Toxicological Assessment of Crude Oil, Oil Spill
Dispersant, and Dispersed Oil’, in Proceedings
of the Twentieth Arctic and Marine Oilspill Program (AMOP) Technical Seminar,
Harris*, B.C.
and J.S.
Bonner,
“Nutrient Dynamics in Sediments Impacted by an Oil Spill during a Flood Event”,
Proceedings for International Association
for Great Lakes Research (IAGLR), 1997,
Harris*,
B.C.,
Bonner, J.S.,
and Autenrieth, R.L., “Effects an Oil Spill and Flood Have on Nutrient
Concentrations in a Low Brackish Marsh”, Proceedings
of WEFTEC '97, Water Environment Federation 70th Annual Conference &
Exposition, Volume 3, pp. 79-88, October 18-22, 1997, Chicago, IL.
Mills*, M.A.,
Bonner, J.S., McDonald, T.J., and
Autenrieth, R.L., “Bioremediation of an Experimental Oil Spill in a Wetland”, In Situ and On-Site Bioremediation; The
Fourth International Symposium (sponsored by Battelle), April 28-May 1,
1997,
Page*,
Simon, M.A.,
Bonner, J.S.,
McDonald, T.J., and Autenrieth, R.L., “Bioaugmentation for the Enhanced
Bioremediation of Petroleum in a Wetland”,
16th International Symposium on Polycyclic
Aromatic Compounds, November
4-8, 1997,
Aldrett*, S., Bonner, J.S., Mcdonald, T.J., Mills, M.A., and Autenrieth, R.L., “Degradation of Crude oil enhanced by Commercial Microbial Cultures”, Proceedings of the 1997 International Oil Spill Conference, American Petroleum Institute, Washington D.C., 995-996, 1997.
Ojo*,
T., Bonner, J., et al., “Characterization of Turbulent and Shear-Augmented
Diffusion Processes in a Shallow Wind-driven Estuary”, submitted
Journal of
Marine Systems in May 2004.
Sterling, M., Bonner, J., Ernest, A., Page, C., and
Autenrieth, R., Application of Fractal Aggregation and Vertical Tranport Model
to Sol-Sediment Systems, Water Research submitted January 2004, re-in review.
Ojo*,
T., Bonner, J., et al., “Dispersion and Mixing Experiments in
Ojo*,
T., Bonner, J., et al., “ Observations of Shear-Augmented Diffusion Processes and
Evaluation of Effective Diffusivity for a Shallow Wind-driven Bay in the Texas
Gulf of Mexico”, ”,
in preparation for submission to
Continental
Shelf Researchl.
Ojo*,
T., Bonner, J., et al., “A Simplified Data-driven 3D Constituent Transport Model (CTM) for
Shallow Coastal Waters: Model Application and Sensitivity Analysis”,
in
preparation for submission
Marine Pollution Bulletin.
Ojo*,
T., Bonner, J., et al., “Integrated Environmental and Oceanographic Assessment of
Coastal Waters through Coupled Real-time Measurements and Direct
Numerical Simulation (DNS)”,
in preparation for submission to
IEEE/Oceanic
Engineering.
Stephens,
F., Bonner, J., Page, C. “Method Development of Thin Layer
Chromatography-Flame Ionization Detection (TLC-FID) For Analysis Of Large Scale
Petroleum Field Studies”, in
preparation for submission to a yet-to-be-determined scientific journal.
Stephens, F., Bonner, J., Page, C. “TLC Application of the TLC-FID Analysis for
Petroleum Bioremediation Field Studies”, in preparation for submission to a yet-to-be-determined scientific
journal.
Garton, L.S., Bonner, J.S., and Autherieth,
R.L. “Assessment of Biological Aggregate Fractal Characteristics”, rejected by Biotechnology and Bioengineering in 2002, in preparation for resubmission to
another journal.
Garton, L.S., Bonner, J.S., and Autherieth, R.L., Fractal Particle Size Distribution – Precision And Accuracy, in preparation for submission to Water Research as a Technical Note.
Harris, B.C., P.D. Dimitriou-Christidis, T.J. McDonald, E. Reese, J.S. Bonner and R.L. Autenrieth, “Methyl Substitution Effects on Biodegradation Kinetics of Naphthalene Compounds”, in preparation for submission to Chemosphere.
PROFESSIONAL, TECHNICAL AND HONORARY SOCIETY MEMBERSHIPS:
American Society of Civil Engineers
American Chemical Society (Division of Environmental Chemistry)
American
Geophysical
Association of Environmental Engineering Professors
Chi Epsilon (Civil Engineering Honor Society)
International
Association for
International Association on Water Quality
Water Environment Federation
HONORS AND AWARDS:
William H. Miner Agricultural Resarch Institute Scholarship
Distinguished
Alumnus,